STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g4812Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
CBR_g23473
Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.883
CBR_g36815
Uncharacterized protein.
    
 0.855
CBR_g36817
Oxidored_molyb domain-containing protein.
    
 0.855
CBR_g38093
Uncharacterized protein.
     
 0.840
CBR_g18889
Uncharacterized protein.
    
 0.818
CBR_g46753
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
   
 0.805
CBR_g19595
Glycolate oxidase (GOX)-like protein.
   
 
 0.789
CBR_g3122
Glutamate: glyoxylate aminotransferase (GGT).
   
 
 0.783
CBR_g8290
Isocitrate lyase.
   
 
 0.780
CBR_g40451
Uncharacterized protein; Belongs to the GST superfamily.
    
 0.773
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.