STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g4878Integrase catalytic domain-containing protein. (5094 aa)    
Predicted Functional Partners:
CBR_g31401
Uncharacterized protein.
  
  
 0.673
CBR_g29440
Uncharacterized protein.
  
   0.553
CBR_g40338
Fmp27_GFWDK domain-containing protein.
  
    0.549
CBR_g30506
Uncharacterized protein.
  
     0.514
CBR_g22314
Uncharacterized protein; Belongs to the DOCK family.
  
   
 0.508
CBR_g31691
Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
  
  
 0.499
CBR_g8951
Uncharacterized protein.
  
    0.491
CBR_g31516
Uncharacterized protein.
  
    0.485
CBR_g51063
Uncharacterized protein.
  
     0.475
CBR_g18855
DUF1995 domain-containing protein.
  
     0.465
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.