STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g5750Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)    
Predicted Functional Partners:
CBR_g40451
Uncharacterized protein; Belongs to the GST superfamily.
   
 0.999
CBR_g63129
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.961
CBR_g28654
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
   
 0.917
CBR_g4803
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.873
CBR_g26033
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.833
CBR_g59821
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.828
CBR_g21835
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.825
CBR_g21131
Ribos_L4_asso_C domain-containing protein.
   
 0.822
CBR_g41408
Ribosomal_L18_c domain-containing protein.
   
 0.822
CBR_g16949
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.821
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.