STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g6473Reverse transcriptase domain-containing protein. (994 aa)    
Predicted Functional Partners:
CBR_g57845
Uncharacterized protein.
    
 0.729
CBR_g32128
SAC domain-containing protein.
    
 0.673
CBR_g54335
TYR_PHOSPHATASE_2 domain-containing protein.
    
 0.643
CBR_g49930
FAS1 domain-containing protein.
    
 0.607
CBR_g20006
MACPF domain-containing protein.
    
 0.607
CBR_g20200
FAS1 domain-containing protein.
    
 0.607
CBR_g32336
Uncharacterized protein.
    
  0.584
CBR_g22080
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.543
CBR_g52746
Uncharacterized protein.
    
 0.534
CBR_g9107
RING-type domain-containing protein.
    
  0.496
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.