STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8420Alanine aminotransferase. (498 aa)    
Predicted Functional Partners:
CBR_g16150
Aspartate aminotransferase.
   
 0.968
CBR_g34329
Aspartate aminotransferase.
   
 0.968
CBR_g44369
Aspartate aminotransferase.
   
 0.948
CBR_g49643
Aspartate aminotransferase.
   
 0.948
CBR_g42122
IGPS domain-containing protein.
    
 0.937
CBR_g20444
Uncharacterized protein.
  
 
 0.896
CBR_g39952
Serine: glyoxylate aminotransferase (SGT).
  
 0.894
CBR_g51244
Uncharacterized protein.
  
 0.894
CBR_g50184
Uncharacterized protein.
     
 0.877
CBR_g19527
Reverse transcriptase domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.857
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.