STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g8861Pectinesterase. (614 aa)    
Predicted Functional Partners:
CBR_g22318
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
   0.651
CBR_g19658
Uncharacterized protein.
    
 0.651
CBR_g42078
Uncharacterized protein.
    
 0.651
CBR_g38118
Uncharacterized protein.
    
  0.649
CBR_g46021
Uncharacterized protein.
    
 0.639
CBR_g38376
Amb_all domain-containing protein.
   
 
  0.586
CBR_g28482
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.578
CBR_g8281
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.578
CBR_g60059
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.572
CBR_g47955
Uncharacterized protein.
    
 0.571
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (24%) [HD]