STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g12052Amb_all domain-containing protein. (433 aa)    
Predicted Functional Partners:
CBR_g9040
Pectinesterase.
   
 
  0.752
CBR_g21898
Pectinesterase domain-containing protein.
   
 
  0.691
CBR_g21901
Pectinesterase domain-containing protein.
   
 
  0.691
CBR_g22273
Pectinesterase.
   
 
  0.691
CBR_g55484
Pectinesterase.
   
 
  0.691
CBR_g16074
RING-type domain-containing protein.
    
 0.673
CBR_g8901
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.654
CBR_g21767
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.654
CBR_g8476
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.596
CBR_g35043
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.575
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.