STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g16125Uncharacterized protein. (794 aa)    
Predicted Functional Partners:
CBR_g4062
Nuclear cap-binding protein subunit 2.
    
 0.627
CBR_g55163
Uncharacterized protein.
    
 0.617
CBR_g4015
MIF4G domain-containing protein.
    
 0.616
CBR_g18868
Uncharacterized protein.
    
 0.610
CBR_g26033
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.588
CBR_g11173
RRM domain-containing protein.
   
  0.584
CBR_g34604
RRM domain-containing protein.
    
  0.584
CBR_g29963
PSP domain-containing protein.
    
  0.568
CBR_g4284
S1 motif domain-containing protein.
   
 0.554
CBR_g11018
Uncharacterized protein.
   
 0.547
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.