STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g17009Uncharacterized protein. (162 aa)    
Predicted Functional Partners:
CBR_g50474
Autophagy protein 5; Required for autophagy.
   
 0.803
CBR_g28076
Integrase catalytic domain-containing protein.
    
 0.764
CBR_g28077
Autophagy_N domain-containing protein.
    
 0.764
CBR_g12113
WD_REPEATS_REGION domain-containing protein.
    
 0.761
CBR_g37122
WD_REPEATS_REGION domain-containing protein.
    
 0.761
CBR_g39927
Uncharacterized protein.
    
 0.744
CBR_g50802
Uncharacterized protein.
    
 0.744
CBR_g51475
Autophagy-related protein.
   
 0.705
CBR_g4422
Autophagy-related protein.
   
 0.705
CBR_g19475
Uncharacterized protein.
     
 0.698
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.