STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g18677UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)    
Predicted Functional Partners:
CBR_g48428
Uncharacterized protein.
   
 0.987
CBR_g4362
Uncharacterized protein.
   
 0.982
CBR_g45419
ThiF domain-containing protein.
  
 0.978
CBR_g4437
Uncharacterized protein.
    
 0.963
CBR_g8027
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.962
CBR_g34629
SP-RING-type domain-containing protein.
    
 0.954
CBR_g861
SP-RING-type domain-containing protein.
   
 0.945
CBR_g4741
HECT domain-containing protein.
    
 0.933
CBR_g34252
RanBD1 domain-containing protein.
   
 0.888
CBR_g38869
RanBD1 domain-containing protein.
   
 0.888
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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