STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g19440Uncharacterized protein. (1707 aa)    
Predicted Functional Partners:
CBR_g74692
Ubiquitin-like domain-containing protein.
    
 0.644
CBR_g763
Ubiquitin-like domain-containing protein.
    
 0.644
CBR_g51339
Ubiquitin-like domain-containing protein.
    
 0.644
CBR_g72634
Ubiquitin-like domain-containing protein.
    
  0.609
CBR_g12084
Ubiquitin-like domain-containing protein.
    
  0.609
CBR_g50650
Ubiquitin-like domain-containing protein.
    
  0.609
CBR_g4741
HECT domain-containing protein.
     
 0.595
CBR_g44397
Uncharacterized protein.
    
  0.580
CBR_g29396
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.574
CBR_g38987
Ubiquitin-like domain-containing protein.
    
  0.570
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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