STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g19664USP domain-containing protein. (991 aa)    
Predicted Functional Partners:
CBR_g19021
Uncharacterized protein.
   
   0.822
CBR_g4334
Uncharacterized protein.
   
 0.753
CBR_g32336
Uncharacterized protein.
   
 0.726
CBR_g8027
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.709
CBR_g3979
Uncharacterized protein.
   
 
 0.671
CBR_g17872
Uncharacterized protein.
   
 0.669
CBR_g17869
Uncharacterized protein.
   
 0.669
CBR_g38987
Ubiquitin-like domain-containing protein.
    
 0.667
CBR_g5724
Uncharacterized protein.
    
 0.667
CBR_g29554
Sde2_N_Ubi domain-containing protein.
    
 0.667
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.