STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g25863Uncharacterized protein. (3165 aa)    
Predicted Functional Partners:
CBR_g19729
Uncharacterized protein.
   
 0.977
CBR_g38548
Uncharacterized protein.
   
 0.975
CBR_g38546
SMC hinge domain-containing protein.
   
 0.975
CBR_g39806
SMC hinge domain-containing protein.
   
 0.974
CBR_g39805
SMC_N domain-containing protein.
   
 0.974
CBR_g19320
Sister chromatid cohesion protein.
   
 0.954
CBR_g33983
Uncharacterized protein.
   
 0.941
CBR_g34518
Rad21_Rec8_N domain-containing protein.
   
 0.941
CBR_g34803
Uncharacterized protein.
   
 0.941
CBR_g88572
Integrase catalytic domain-containing protein.
   
 0.893
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.