STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g26031Ribosomal_S4 domain-containing protein. (146 aa)    
Predicted Functional Partners:
CBR_g37218
Brix domain-containing protein.
   
 0.999
CBR_g984
Uncharacterized protein.
   
 0.998
CBR_g23447
KH domain-containing protein.
   
 0.998
CBR_g26033
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.998
CBR_g26483
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.998
CBR_g34512
Sas10 domain-containing protein.
   
  0.998
CBR_g12704
WD_REPEATS_REGION domain-containing protein.
   
 0.997
CBR_g50978
WD_REPEATS_REGION domain-containing protein.
   
 0.997
CBR_g21828
Uncharacterized protein.
   
 0.996
CBR_g22318
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 0.996
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.