STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g26242Glyco_trans_2-like domain-containing protein. (1284 aa)    
Predicted Functional Partners:
CBR_g28541
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
   
 0.977
CBR_g8796
Uncharacterized protein.
   
 0.977
CBR_g19000
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.961
CBR_g23824
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.954
CBR_g24341
Peptidase_M24 domain-containing protein.
  
 
 0.948
CBR_g38410
Uncharacterized protein.
  
 
 0.948
CBR_g38286
WD_REPEATS_REGION domain-containing protein.
   
 
 0.939
CBR_g38896
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.936
CBR_g18642
WD_REPEATS_REGION domain-containing protein.
   
 
 0.935
CBR_g19336
CP-type G domain-containing protein.
   
 0.933
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.