STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g27939GFO_IDH_MocA domain-containing protein. (440 aa)    
Predicted Functional Partners:
CBR_g319
Uncharacterized protein.
  
 
 0.952
CBR_g29945
PKS_ER domain-containing protein.
  
 
 0.781
CBR_g51934
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
  
 
 0.781
CBR_g12018
SGL domain-containing protein.
  
 
 0.775
CBR_g49403
SGL domain-containing protein.
  
 
 0.775
CBR_g4778
Reverse transcriptase domain-containing protein.
  
 0.761
CBR_g24145
Uncharacterized protein.
  
 0.761
CBR_g29486
Uncharacterized protein.
  
 0.761
CBR_g49415
Uncharacterized protein.
  
 
 0.749
CBR_g34363
Integrase catalytic domain-containing protein.
  
 
 0.736
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.