STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g28724ATP-dependent DNA helicase; Belongs to the helicase family. (3764 aa)    
Predicted Functional Partners:
CBR_g8027
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.587
CBR_g26038
DNA_pol_E_B domain-containing protein.
   
 
 0.579
CBR_g19658
Uncharacterized protein.
   
 
 0.568
CBR_g42078
Uncharacterized protein.
   
 
 0.568
CBR_g26360
3'-5' exonuclease domain-containing protein.
  
 
 0.523
CBR_g39230
Uncharacterized protein.
  
 
 0.523
CBR_g149
Nop domain-containing protein.
   
    0.503
CBR_g44539
AAA_23 domain-containing protein.
   
 
 0.482
CBR_g58810
AAA_16 domain-containing protein.
    
 
 0.473
CBR_g477
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
  0.461
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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