STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g30621Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
CBR_g39720
Uncharacterized protein.
   
 0.988
CBR_g778
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.986
CBR_g4043
Nuclear pore protein.
   
 0.976
CBR_g22013
Uncharacterized protein.
   
 0.963
CBR_g54315
Uncharacterized protein.
    
 0.958
CBR_g55394
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.956
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 0.956
CBR_g76107
Uncharacterized protein.
   
 0.955
CBR_g37692
Uncharacterized protein.
   
 0.955
CBR_g21943
Nup54 domain-containing protein.
   
 0.952
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (18%) [HD]