STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g31439Rab-GAP TBC domain-containing protein. (663 aa)    
Predicted Functional Partners:
CBR_g4187
Uncharacterized protein.
   
 0.811
CBR_g30283
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 0.800
CBR_g51475
Autophagy-related protein.
   
 0.676
CBR_g4422
Autophagy-related protein.
   
 0.676
CBR_g34667
Uncharacterized protein.
    
 0.600
CBR_g10824
Polysacc_synt_4 domain-containing protein.
    
 0.600
CBR_g10819
Polysacc_synt_4 domain-containing protein.
    
 0.600
CBR_g51661
Uncharacterized protein.
    
 0.600
CBR_g69624
Uncharacterized protein.
    
 0.600
CBR_g9133
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
     
 0.527
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (26%) [HD]