STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g33918Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
CBR_g45475
Macro domain-containing protein.
    
 
 0.991
CBR_g19434
SAP domain-containing protein.
    
 0.965
CBR_g29902
DNA ligase.
    
 0.958
CBR_g35050
DNA_ligase_A_N domain-containing protein.
    
 0.945
CBR_g30081
Ku domain-containing protein.
    
 0.944
CBR_g50203
DNA_LIGASE_A3 domain-containing protein.
    
 0.944
CBR_g50206
Uncharacterized protein.
    
 0.944
CBR_g46429
Uncharacterized protein.
    
 0.926
CBR_g45434
DNA ligase.
    
 0.819
CBR_g66772
PARP-type domain-containing protein.
    
 
 0.747
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.