STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g36287Smg4_UPF3 domain-containing protein. (992 aa)    
Predicted Functional Partners:
CBR_g19771
Uncharacterized protein.
    
 0.967
CBR_g6624
RRM domain-containing protein.
    
 0.962
CBR_g50691
PWI domain-containing protein.
    
 0.959
CBR_g39626
Helicase ATP-binding domain-containing protein.
    
 0.957
CBR_g8052
Helicase ATP-binding domain-containing protein.
    
 0.957
CBR_g19436
Uncharacterized protein.
   
 0.955
CBR_g50338
Uncharacterized protein.
   
 0.929
CBR_g37151
Uncharacterized protein.
   
 0.925
CBR_g28521
RRM domain-containing protein.
    
 0.924
CBR_g53494
DRBM domain-containing protein.
    
 0.918
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.