STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g37119Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (1054 aa)    
Predicted Functional Partners:
CBR_g26360
3'-5' exonuclease domain-containing protein.
    
 0.981
CBR_g39230
Uncharacterized protein.
    
 0.981
CBR_g17098
Uncharacterized protein.
   
 0.962
CBR_g6357
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.941
CBR_g49985
SAS-6_N domain-containing protein.
   
 0.938
CBR_g8027
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.903
CBR_g48040
Mre11_DNA_bind domain-containing protein.
   
 0.897
CBR_g34308
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
   0.880
CBR_g41660
DUF1767 domain-containing protein.
    
 0.880
CBR_g37700
DNA helicase; Belongs to the MCM family.
   
 0.878
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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