STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g38797F-box domain-containing protein. (449 aa)    
Predicted Functional Partners:
CBR_g16074
RING-type domain-containing protein.
    
 0.673
CBR_g8901
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.654
CBR_g21767
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.654
CBR_g8476
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.575
CBR_g35043
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.575
CBR_g35044
Uncharacterized protein; Belongs to the cullin family.
    
 0.575
CBR_g72993
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.575
CBR_g20299
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.527
CBR_g18772
TIP120 domain-containing protein.
    
 0.513
CBR_g905
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
  0.511
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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