STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g39755Reverse transcriptase domain-containing protein. (970 aa)    
Predicted Functional Partners:
CBR_g6607
Uncharacterized protein.
     
 0.610
CBR_g17647
Uncharacterized protein.
     
 0.610
CBR_g30137
Uncharacterized protein.
     
 0.610
CBR_g57605
Uncharacterized protein.
     
 0.610
CBR_g29936
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
  0.559
CBR_g36330
BTB domain-containing protein.
    
  0.559
CBR_g28825
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.554
CBR_g12597
ZT_dimer domain-containing protein.
   
 
 0.550
CBR_g29413
Uncharacterized protein.
   
    0.536
CBR_g12311
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
  0.491
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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