STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g39803CCHC-type domain-containing protein. (600 aa)    
Predicted Functional Partners:
CBR_g21827
Sm domain-containing protein.
    
  0.533
CBR_g39570
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
  0.529
CBR_g18907
Small nuclear ribonucleoprotein G.
    
  0.526
CBR_g26483
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
   0.524
CBR_g4062
Nuclear cap-binding protein subunit 2.
   
  0.516
CBR_g23159
HSA domain-containing protein.
   
  0.498
CBR_g23157
Uncharacterized protein.
   
  0.498
CBR_g44940
Small nuclear ribonucleoprotein Sm D2.
    
  0.493
CBR_g4015
MIF4G domain-containing protein.
    
  0.486
CBR_g48393
Sm domain-containing protein.
    
  0.482
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.