STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g40648Uncharacterized protein. (502 aa)    
Predicted Functional Partners:
CBR_g50476
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.998
CBR_g21235
Uncharacterized protein.
   
 0.997
CBR_g41534
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.996
CBR_g52047
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.995
CBR_g23797
MRP-S28 domain-containing protein.
   
 0.994
CBR_g26483
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.992
CBR_g37184
Uncharacterized protein.
   
  0.991
CBR_g6324
Ribosomal_L18e/L15P domain-containing protein.
   
   0.990
CBR_g23715
Uncharacterized protein.
   
 
 0.989
CBR_g21848
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.986
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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