STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g45965Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
CBR_g21828
Uncharacterized protein.
  
    0.875
CBR_g29661
Ribosomal_L7Ae domain-containing protein.
   
    0.866
CBR_g63129
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
    0.855
CBR_g26483
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
    0.851
CBR_g52047
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
    0.848
CBR_g22318
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
    0.841
CBR_g16047
Uncharacterized protein.
   
    0.839
CBR_g8595
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
  
   0.837
CBR_g422
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
    0.836
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
    0.835
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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