STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g47053Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
CBR_g44531
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
     
 0.896
CBR_g24311
Reverse transcriptase domain-containing protein.
     
 0.859
CBR_g24313
YjeF N-terminal domain-containing protein.
     
 0.859
CBR_g19052
CTP_transf_like domain-containing protein.
     
 0.848
CBR_g29764
CTP_transf_like domain-containing protein.
     
 0.844
CBR_g55398
GP-PDE domain-containing protein.
   
 
 0.836
CBR_g18896
GP-PDE domain-containing protein.
     
 0.831
CBR_g12736
Phos_pyr_kin domain-containing protein.
     
 0.821
CBR_g3742
SGNH_hydro domain-containing protein.
     
 0.809
CBR_g34001
Uncharacterized protein.
     
 0.809
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.