STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g48379Uncharacterized protein. (614 aa)    
Predicted Functional Partners:
CBR_g39826
Uncharacterized protein.
   
 
 0.970
CBR_g44397
Uncharacterized protein.
   
 
 0.926
CBR_g45271
PWI domain-containing protein.
   
0.901
CBR_g19725
CPSF_A domain-containing protein.
    
 
 0.876
CBR_g21780
Protein kinase domain-containing protein.
    
 
 0.863
CBR_g50691
PWI domain-containing protein.
   
 0.827
CBR_g38502
Uncharacterized protein.
   
 0.770
CBR_g12909
Uncharacterized protein.
   
 
 0.763
CBR_g5735
Uncharacterized protein.
    
  0.760
CBR_g3777
Uncharacterized protein.
   
  0.749
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.