STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g48280Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (889 aa)    
Predicted Functional Partners:
CBR_g50887
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.942
CBR_g22406
Uncharacterized protein.
    
 0.917
CBR_g48741
Uncharacterized protein.
     
 0.901
CBR_g34812
G domain-containing protein.
     
 0.821
CBR_g36980
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
    
 0.815
CBR_g36983
PABS domain-containing protein.
    
 0.815
CBR_g45375
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
    
 0.815
CBR_g2960
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.814
CBR_g21221
Uncharacterized protein.
    
 0.814
CBR_g21223
DEAD domain-containing protein.
    
 0.814
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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