STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g49614DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1060 aa)    
Predicted Functional Partners:
CBR_g49328
RPOLD domain-containing protein.
  
 0.982
CBR_g31915
Uncharacterized protein.
  
 0.979
CBR_g20014
Uncharacterized protein.
   
 0.954
CBR_g48986
Uncharacterized protein.
   
 0.954
CBR_g17935
RPOL4c domain-containing protein.
    
 0.953
CBR_g39879
TFIIB-type domain-containing protein.
    
 0.947
CBR_g44398
Spt4 domain-containing protein.
    
 0.947
CBR_g48579
Uncharacterized protein.
   
 0.941
CBR_g74690
RPA43_OB domain-containing protein.
   
 0.935
CBR_g21779
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.934
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.