STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g50810Clp_N domain-containing protein. (475 aa)    
Predicted Functional Partners:
CBR_g40856
ClpS domain-containing protein.
  
 
 0.882
CBR_g51500
Uncharacterized protein.
  
 
 0.780
CBR_g3171
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.715
CBR_g37635
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.715
CBR_g51920
Uncharacterized protein.
  
 
 0.715
CBR_g24278
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.692
CBR_g32415
Fe/B12 periplasmic-binding domain-containing protein.
  
 
 0.692
CBR_g32417
GATase cobBQ-type domain-containing protein.
  
 
 0.692
CBR_g38038
Uncharacterized protein.
  
 
 0.692
CBR_g45224
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.692
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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