STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g53531BTB domain-containing protein. (260 aa)    
Predicted Functional Partners:
CBR_g23715
Uncharacterized protein.
   
 
 0.551
CBR_g37539
Uncharacterized protein.
   
 
 0.549
CBR_g30055
Uncharacterized protein.
   
   0.545
CBR_g37184
Uncharacterized protein.
   
   0.544
CBR_g51380
Uncharacterized protein.
   
   0.528
CBR_g21235
Uncharacterized protein.
   
   0.527
CBR_g8145
Uncharacterized protein.
   
   0.524
CBR_g8600
Uncharacterized protein.
   
   0.518
CBR_g40648
Uncharacterized protein.
   
 
 0.516
CBR_g40529
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
   
   0.515
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.