Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g53496Uncharacterized protein. (1039 aa)    
Predicted Functional Partners:
CBR_g12873
Uncharacterized protein.
    
  0.801
CBR_g16886
Uncharacterized protein.
    
  0.801
CBR_g34879
Uncharacterized protein.
    
  0.801
CBR_g49538
Integrase_H2C2 domain-containing protein.
    
  0.801
CBR_g26451
Uncharacterized protein.
    
  0.720
CBR_g34531
Uncharacterized protein.
    
  0.638
CBR_g34534
Cyclic nucleotide-binding domain-containing protein.
    
  0.638
CBR_g34538
PPM-type phosphatase domain-containing protein.
    
  0.638
CBR_g57644
Protein kinase domain-containing protein.
    
  0.638
CBR_g19475
Uncharacterized protein.
    
  0.630
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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