STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g54102Prohibitin. (185 aa)    
Predicted Functional Partners:
CBR_g72715
Prohibitin.
  
 0.997
CBR_g12581
Prohibitin.
  
0.996
CBR_g27895
Uncharacterized protein.
   
 
 0.875
CBR_g39080
Uncharacterized protein; Belongs to the peptidase M16 family.
  
 0.831
CBR_g52747
RECA_2 domain-containing protein.
  
 0.831
CBR_g79181
Peptidase_M41 domain-containing protein.
   
 0.807
CBR_g26107
Uncharacterized protein.
   
 0.807
CBR_g26105
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.807
CBR_g32425
AAA domain-containing protein.
   
 0.807
CBR_g46223
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
   
 0.807
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.