STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g59364Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
CBR_g39962
AMMECR1 domain-containing protein.
 
    0.765
CBR_g20310
Uncharacterized protein.
   
 
  0.711
CBR_g41592
Uncharacterized protein.
   
 
  0.711
CBR_g6392
Uncharacterized protein.
   
 0.685
CBR_g26460
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
 0.592
CBR_g19595
Glycolate oxidase (GOX)-like protein.
  
 
  0.588
CBR_g32186
Uncharacterized protein.
   
  0.557
CBR_g221
AB hydrolase-1 domain-containing protein.
  
 
  0.554
CBR_g16003
AB hydrolase-1 domain-containing protein.
  
 
  0.554
CBR_g18583
AB hydrolase-1 domain-containing protein.
  
 
  0.554
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.