Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D782_0010Tol biopolymer transport system, periplasmic component-related protein; PFAM: Protein of unknown function (DUF3748). (408 aa)    
Predicted Functional Partners:
D782_3742
PFAM: Bacterial chaperone lipoprotein (PulS_OutS).
  
     0.764
D782_2340
PFAM: Dicarboxylate transport.
  
     0.761
rcsF
Hypothetical protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.757
D782_2533
PFAM: YniB-like protein.
  
     0.731
D782_0011
Putative periplasmic lipoprotein; PFAM: Protein of unknown function (DUF1375).
  
   
 0.719
D782_0742
PFAM: Protein of unknown function (DUF2884).
  
     0.706
D782_0252
Putative membrane protein; PFAM: Protein of unknown function (DUF1145).
  
     0.694
D782_2707
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
  
     0.687
D782_0175
PFAM: Protein of unknown function (DUF3053).
  
     0.685
thiK
Putative choline kinase involved in LPS biosynthesis; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.659
Your Current Organism:
Enterobacteriaceae bacterium strain
NCBI taxonomy Id: 693444
Other names: E. bacterium strain FGI 57, Enterobacteriaceae bacterium strain FGI 57
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