node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplQ | D782_4290 | D782_0406 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 0.993 |
rplA | rplS | D782_4290 | D782_1070 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
rplA | rplT | D782_4290 | D782_1942 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.993 |
rplA | rplU | D782_4290 | D782_0508 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.992 |
rplA | rpmA | D782_4290 | D782_0509 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.990 |
rplA | rpsB | D782_4290 | D782_3702 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.994 |
rplA | rpsG | D782_4290 | D782_0372 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S7, bacterial/organelle; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.994 |
rplA | rpsP | D782_4290 | D782_1067 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; manually curated; Belongs to the bacterial ribosomal protein bS16 family. | 0.993 |
rplA | rpsR | D782_4290 | D782_4064 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.992 |
rplA | trmD | D782_4290 | D782_1069 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.920 |
rplQ | rplA | D782_0406 | D782_4290 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.993 |
rplQ | rplS | D782_0406 | D782_1070 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.994 |
rplQ | rplT | D782_0406 | D782_1942 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.992 |
rplQ | rplU | D782_0406 | D782_0508 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.991 |
rplQ | rpmA | D782_0406 | D782_0509 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
rplQ | rpsB | D782_0406 | D782_3702 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.992 |
rplQ | rpsG | D782_0406 | D782_0372 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | Ribosomal protein S7, bacterial/organelle; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.993 |
rplQ | rpsP | D782_0406 | D782_1067 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; manually curated; Belongs to the bacterial ribosomal protein bS16 family. | 0.993 |
rplQ | rpsR | D782_0406 | D782_4064 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.991 |
rplQ | trmD | D782_0406 | D782_1069 | PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.797 |