STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysN_12-aminoadipate transaminase. (401 aa)    
Predicted Functional Partners:
gsiA_2
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.741
KJL45064.1
Hypothetical protein.
       0.709
gsiD_2
Glutathione transport system permease protein GsiD.
       0.681
gsiC_1
Glutathione transport system permease protein GsiC.
       0.681
mdlB
(S)-mandelate dehydrogenase.
  
 
  0.632
KJL42873.1
Lactate 2-monooxygenase.
  
 
  0.632
trpE
Anthranilate synthase component 1.
   
 
 0.590
gsiB_1
Glutathione-binding protein GsiB precursor.
 
     0.576
KJL45070.1
Putative FAD-linked oxidoreductase.
 
     0.557
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
   
 
  0.552
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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