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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apr_1Subtilisin DY. (424 aa)    
Predicted Functional Partners:
KJL44817.1
Hypothetical protein.
       0.850
KJL44819.1
NADH dehydrogenase-like protein.
 
     0.767
eccCa1_1
ESX-1 secretion system protein EccCa1.
  
 
 0.726
eccCa1_3
ESX-1 secretion system protein EccCa1.
  
 
 0.726
KJL40190.1
Hypothetical protein.
  
     0.711
KJL44816.1
Septum formation initiator.
  
    0.705
KJL39908.1
Hypothetical protein.
   
  0.672
KJL41530.1
Undecaprenyl pyrophosphate phosphatase.
  
  
  0.648
KJL41626.1
Undecaprenyl pyrophosphate phosphatase.
  
  
  0.633
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.628
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.