Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL43066.1 | KJL44823.1 | RS82_01555 | RS82_00546 | Hypothetical protein. | LemA family protein. | 0.728 |
KJL43598.1 | KJL44823.1 | RS82_01293 | RS82_00546 | Hypothetical protein. | LemA family protein. | 0.692 |
KJL44821.1 | KJL44822.1 | RS82_00544 | RS82_00545 | D-threonine aldolase. | L-gulono-1,4-lactone dehydrogenase. | 0.952 |
KJL44821.1 | KJL44823.1 | RS82_00544 | RS82_00546 | D-threonine aldolase. | LemA family protein. | 0.601 |
KJL44822.1 | KJL44821.1 | RS82_00545 | RS82_00544 | L-gulono-1,4-lactone dehydrogenase. | D-threonine aldolase. | 0.952 |
KJL44822.1 | KJL44823.1 | RS82_00545 | RS82_00546 | L-gulono-1,4-lactone dehydrogenase. | LemA family protein. | 0.575 |
KJL44823.1 | KJL43066.1 | RS82_00546 | RS82_01555 | LemA family protein. | Hypothetical protein. | 0.728 |
KJL44823.1 | KJL43598.1 | RS82_00546 | RS82_01293 | LemA family protein. | Hypothetical protein. | 0.692 |
KJL44823.1 | KJL44821.1 | RS82_00546 | RS82_00544 | LemA family protein. | D-threonine aldolase. | 0.601 |
KJL44823.1 | KJL44822.1 | RS82_00546 | RS82_00545 | LemA family protein. | L-gulono-1,4-lactone dehydrogenase. | 0.575 |
KJL44823.1 | KJL44824.1 | RS82_00546 | RS82_00547 | LemA family protein. | Hypothetical protein. | 0.498 |
KJL44824.1 | KJL44823.1 | RS82_00547 | RS82_00546 | Hypothetical protein. | LemA family protein. | 0.498 |