STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL44601.1Hypothetical protein. (885 aa)    
Predicted Functional Partners:
rafR
HTH-type transcriptional regulator RafR.
 
     0.808
KJL44599.1
Hypothetical protein.
 
     0.805
KJL43460.1
Alpha-L-fucosidase.
 
 
  0.780
KJL43453.1
Alpha-L-fucosidase.
 
 
  0.778
lacZ_1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.772
KJL45669.1
Fasciclin domain protein.
  
  0.757
KJL44955.1
Hypothetical protein.
   
  0.756
KJL44072.1
Hypothetical protein.
   
  0.756
KJL41081.1
Hypothetical protein.
   
  0.756
KJL39742.1
Hypothetical protein.
   
  0.756
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.