STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL43805.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
KJL43806.1
O-Antigen ligase.
 
     0.952
KJL43803.1
Hypothetical protein.
 
     0.879
wbbL
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
     0.818
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.784
KJL43802.1
Hypothetical protein.
 
     0.776
KJL43824.1
Mo-co oxidoreductase dimerization domain protein.
  
     0.768
KJL43822.1
UDP-glucose 4-epimerase.
 
     0.762
KJL43814.1
Glycogen synthase.
  
    0.757
wzxC
Lipopolysaccharide biosynthesis protein WzxC.
 
  
 0.735
hyaD
Hyaluronan synthase.
 
    0.731
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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