STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL43856.16-hydroxy-D-nicotine oxidase. (747 aa)    
Predicted Functional Partners:
cdr
Coenzyme A disulfide reductase.
  
 
 0.798
KJL43857.1
Bacterial regulatory protein, tetR family.
       0.773
fprA_3
NADPH-ferredoxin reductase FprA.
     
 0.723
qcrC
Menaquinol-cytochrome c reductase cytochrome c subunit.
    
  0.691
tag
DNA-3-methyladenine glycosylase 1.
       0.648
gltB_2
Glutamate synthase [NADPH] large chain.
    
 0.648
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
   
 
 0.611
ddn_1
Deazaflavin-dependent nitroreductase.
  
  
  0.608
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
 0.588
KJL41831.1
Putative FAD-linked oxidoreductase.
  
 
0.587
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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