STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhdG_2Putative amino acid permease YhdG. (492 aa)    
Predicted Functional Partners:
KJL43866.1
Universal stress protein family protein.
 
    0.853
malL_1
Oligo-1,6-glucosidase.
    
  0.819
malL_2
Oligo-1,6-glucosidase.
    
  0.819
malL_3
Oligo-1,6-glucosidase.
    
  0.819
malZ
Maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
    
  0.819
malL_4
Oligo-1,6-glucosidase.
    
  0.819
glgE1
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
  0.819
amy
Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family.
    
  0.819
yjeH
Inner membrane protein YjeH.
  
     0.701
yhdG_4
Putative amino acid permease YhdG.
  
     0.654
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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