Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL39815.1 | hypBA2_1 | RS82_04024 | RS82_01354 | ComEC family competence protein. | Beta-L-arabinobiosidase precursor. | 0.596 |
KJL39815.1 | xpsE | RS82_04024 | RS82_02088 | ComEC family competence protein. | Type II secretion system protein E. | 0.713 |
KJL40570.1 | KJL43652.1 | RS82_03186 | RS82_01348 | Hypothetical protein. | Hypothetical protein. | 0.799 |
KJL40570.1 | hypBA2_1 | RS82_03186 | RS82_01354 | Hypothetical protein. | Beta-L-arabinobiosidase precursor. | 0.518 |
KJL40570.1 | xynA | RS82_03186 | RS82_03187 | Hypothetical protein. | Endo-1,4-beta-xylanase A precursor. | 0.767 |
KJL43652.1 | KJL40570.1 | RS82_01348 | RS82_03186 | Hypothetical protein. | Hypothetical protein. | 0.799 |
KJL43652.1 | KJL43653.1 | RS82_01348 | RS82_01349 | Hypothetical protein. | Hypothetical protein. | 0.892 |
KJL43652.1 | hypBA2_1 | RS82_01348 | RS82_01354 | Hypothetical protein. | Beta-L-arabinobiosidase precursor. | 0.573 |
KJL43652.1 | xynA | RS82_01348 | RS82_03187 | Hypothetical protein. | Endo-1,4-beta-xylanase A precursor. | 0.494 |
KJL43653.1 | KJL43652.1 | RS82_01349 | RS82_01348 | Hypothetical protein. | Hypothetical protein. | 0.892 |
KJL43653.1 | hypBA2_1 | RS82_01349 | RS82_01354 | Hypothetical protein. | Beta-L-arabinobiosidase precursor. | 0.538 |
KJL43653.1 | xynA | RS82_01349 | RS82_03187 | Hypothetical protein. | Endo-1,4-beta-xylanase A precursor. | 0.559 |
KJL43667.1 | hypBA2_1 | RS82_01363 | RS82_01354 | Maltose ABC transporter periplasmic protein. | Beta-L-arabinobiosidase precursor. | 0.701 |
KJL43667.1 | lacF_3 | RS82_01363 | RS82_01364 | Maltose ABC transporter periplasmic protein. | Lactose transport system permease protein LacF. | 0.951 |
KJL43667.1 | pel | RS82_01363 | RS82_00102 | Maltose ABC transporter periplasmic protein. | Pectate lyase precursor. | 0.400 |
hypBA1_1 | hypBA2_1 | RS82_01355 | RS82_01354 | Non-reducing end beta-L-arabinofuranosidase. | Beta-L-arabinobiosidase precursor. | 0.865 |
hypBA1_1 | xynA | RS82_01355 | RS82_03187 | Non-reducing end beta-L-arabinofuranosidase. | Endo-1,4-beta-xylanase A precursor. | 0.707 |
hypBA2_1 | KJL39815.1 | RS82_01354 | RS82_04024 | Beta-L-arabinobiosidase precursor. | ComEC family competence protein. | 0.596 |
hypBA2_1 | KJL40570.1 | RS82_01354 | RS82_03186 | Beta-L-arabinobiosidase precursor. | Hypothetical protein. | 0.518 |
hypBA2_1 | KJL43652.1 | RS82_01354 | RS82_01348 | Beta-L-arabinobiosidase precursor. | Hypothetical protein. | 0.573 |
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