STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL43074.1Phosphodiesterase YaeI. (310 aa)    
Predicted Functional Partners:
pbpG_1
Penicillin-binding protein 2D.
       0.806
KJL43076.1
Hypothetical protein.
 
     0.723
KJL43077.1
Endoribonuclease L-PSP.
 
     0.701
KJL39731.1
Hypothetical protein.
  
     0.687
gpmB
Phosphoglycerate mutase GpmB.
  
     0.637
whiA
Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation.
  
     0.636
KJL39776.1
Hypothetical protein.
  
     0.601
KJL39741.1
Hypothetical protein.
  
     0.593
KJL40305.1
Hypothetical protein.
  
     0.567
KJL44816.1
Septum formation initiator.
 
     0.558
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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