STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spk1_1Serine/threonine-protein kinase PK-1. (476 aa)    
Predicted Functional Partners:
garA
Glycogen accumulation regulator GarA.
  
 
 
 0.929
pstP_2
PP2C-family Ser/Thr phosphatase.
 
 0.901
pstP_3
PP2C-family Ser/Thr phosphatase.
 
 0.901
pstP_1
PP2C-family Ser/Thr phosphatase.
 
 0.898
stp_4
Serine/threonine phosphatase stp.
 
 0.888
fhaA
FHA domain-containing protein FhaA.
 
 
 
 0.748
fhaB
FHA domain-containing protein FhaB.
 
 
 
 0.736
pknB_2
Serine/threonine-protein kinase PknB.
 
 
0.654
ywqD
Tyrosine-protein kinase YwqD.
    
   0.652
spk1_2
Serine/threonine-protein kinase PK-1.
 
 
0.640
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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