Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
lacG_4Lactose transport system permease protein LacG. (269 aa)    
Predicted Functional Partners:
lacF_5
Lactose transport system permease protein LacF.
 
  0.996
lacE
Lactose-binding protein precursor.
 
  0.934
araP_1
L-arabinose transport system permease protein AraP.
  
  0.854
lacF_14
Lactose transport system permease protein LacF.
  
  0.853
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.847
lacF_8
Lactose transport system permease protein LacF.
 
  0.847
lacF_13
Lactose transport system permease protein LacF.
 
  0.845
araP_5
L-arabinose transport system permease protein AraP.
  
  0.844
cbgA
Beta-galactosidase.
 
     0.834
lacF_6
Lactose transport system permease protein LacF.
  
  0.829
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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