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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL42544.1Hypothetical protein. (639 aa)    
Predicted Functional Partners:
KJL44185.1
Hypothetical protein.
    
   0.681
smc_2
Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
   0.681
KJL39706.1
Hypothetical protein.
    
   0.662
KJL41845.1
Putative endoglucanase.
    
 0.564
guaA_1
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.534
KJL44990.1
Hypothetical protein.
     
 0.529
epsH_2
Putative glycosyltransferase EpsH.
    
  0.529
KJL42408.1
Hypothetical protein.
     
 0.523
KJL42543.1
Acetyltransferase (GNAT) family protein.
       0.508
cenA
Endoglucanase A precursor; Belongs to the glycosyl hydrolase family 6.
  
  
 0.483
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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